Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102346998Sulfotransferase; Belongs to the sulfotransferase 1 family. (307 aa)    
Predicted Functional Partners:
LOC102358549
Vomeronasal type-1 receptor.
      
 0.728
GPR1
G protein-coupled receptor 1.
      
 0.699
MB
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
 0.697
LOC106705972
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.660
LOC102346357
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
 0.652
ZDHHC23
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.597
SULT4A1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
     
 0.589
YJU2
YJU2 splicing factor homolog.
      
 0.582
B3GNT10
Hexosyltransferase.
      
 0.531
WFIKKN1
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1.
      
 0.506
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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