Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERI1Exoribonuclease 1. (259 aa)    
Predicted Functional Partners:
SLBP
Stem-loop binding protein.
    
 
 0.959
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.848
ANO9
Anoctamin.
      
 0.843
ANKLE1
Ankyrin repeat and LEM domain containing 1.
      
 0.820
NUDCD1
NudC domain containing 1.
    
   0.819
SEPSECS
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
    
 
 0.808
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
      
 0.801
EXOSC5
Exosome component 5.
    
 0.761
RPL30
Ribosomal protein L30.
     
 0.735
UNC119
Unc-119 lipid binding chaperone.
   
  
 0.734
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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