STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI1Exoribonuclease 1. (259 aa)    
Predicted Functional Partners:
SLBP
Stem-loop binding protein.
   
 
 0.948
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.780
ANKLE1
Ankyrin repeat and LEM domain containing 1.
      
 0.699
GTSF1
Gametocyte specific factor 1.
    
 
 0.649
RPL30
Ribosomal protein L30.
     
 0.644
DROSHA
Drosha ribonuclease III.
   
 
 0.620
EXOSC5
Exosome component 5.
    
 0.613
XRN1
5'-3' exoribonuclease 1.
      
 0.602
TEX10
Testis expressed 10.
   
 
  0.579
RPL4
Ribosomal protein L4.
    
 0.567
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.