Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAT2Adenosine deaminase tRNA specific 2. (188 aa)    
Predicted Functional Partners:
ADAT3
Adenosine deaminase tRNA specific 3.
   
 0.999
ADAT1
Adenosine deaminase tRNA specific 1.
      
 0.929
TYMS
Thymidylate synthetase.
  
 
 0.803
ENDOV
Endonuclease V.
     
 0.742
ADAR
Adenosine deaminase RNA specific.
      
 0.727
DALRD3
DALR anticodon binding domain containing 3.
     
 0.717
APOBEC2
Apolipoprotein B mRNA editing enzyme catalytic subunit 2.
      
 0.700
FUCA2
Alpha-L-fucosidase 2.
      
 0.675
LOC102346586
Uncharacterized protein.
      
 0.641
TK1
Thymidine kinase.
    
 0.636
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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