Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A0L5_LATCHUncharacterized protein. (151 aa)    
Predicted Functional Partners:
VRK2
VRK serine/threonine kinase 2.
    
 0.512
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
    
 0.512
LOC102354290
Uncharacterized protein.
   
 0.478
WDR90
WD repeat domain 90.
   
 0.476
LOC102360619
Uncharacterized protein.
    
 0.461
LOC102350821
Serine/threonine-protein phosphatase.
    
 0.447
PPP2CA
Serine/threonine-protein phosphatase.
    
 0.447
PPP2R1A
Protein phosphatase 2 scaffold subunit Aalpha.
    
  0.442
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
    
  0.442
PAXIP1
PAX interacting protein 1.
   
 0.441
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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