Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPM3Tropomyosin 3; Belongs to the tropomyosin family. (286 aa)    
Predicted Functional Partners:
TNNT2
Troponin T2, cardiac type.
   
 0.981
TNNI3
Uncharacterized protein.
   
 0.978
ACTC1
Zgc:86709.
   
 0.950
LOC102364634
Uncharacterized protein.
   
 0.939
LOC102362273
Uncharacterized protein.
   
 0.939
TPM2
Tropomyosin 2; Belongs to the tropomyosin family.
  
  
0.901
TNNI2
Troponin I2, fast skeletal type.
   
 0.846
TMOD3
Tropomodulin 3.
   
 0.842
TNNI1
Troponin I1, slow skeletal type.
   
 0.831
TNNT1
Troponin T1, slow skeletal type.
   
 0.822
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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