Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102350164Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
CCN2
Cellular communication network factor 2.
   
  
 0.736
ANKRD1
Ankyrin repeat domain 1.
      
 0.572
AMOTL2
Angiomotin like 2.
   
  
 0.550
H2ZTF7_LATCH
Fam20C domain-containing protein.
     
  0.475
FAM20C
Fam20C domain-containing protein.
     
  0.475
LATS1
Large tumor suppressor kinase 1.
      
 0.469
SAV1
Salvador family WW domain containing protein 1.
      
 0.451
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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