Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC102352291PA2c domain-containing protein. (319 aa)    
Predicted Functional Partners:
PLA2G12A
Phospholipase A2 group XIIA.
     
 0.962
PLA2G12B
Phospholipase A2 group XIIB.
     
 0.937
PLA2G1B
Phospholipase A(2).
     
 0.937
LOC102359454
Phospholipase A(2).
     
 0.937
LOC102351457
Retinoic acid receptor responder 3-like.
     
 0.927
PTDSS1
Phosphatidylserine synthase 1.
     
 0.924
PLA2G4F
Phospholipase A2.
     
 0.923
PEMT
Phosphatidylethanolamine N-methyltransferase; Catalyzes the three sequential steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylethanolamine (PE) to phosphatidylmonomethylethanolamine (PMME), PMME to phosphatidyldimethylethanolamine (PDME), and PDME to phosphatidylcholine (PC); Belongs to the class VI-like SAM-binding methyltransferase superfamily. PEMT/PEM2 methyltransferase family.
     
 0.921
ALOX5
Arachidonate 5-lipoxygenase.
     
 0.917
LOC102351206
Phospholipase A2.
     
 0.916
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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