STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF6Ras association domain family member 6. (319 aa)    
Predicted Functional Partners:
AMER2
APC membrane recruitment protein 2.
    
 
 0.557
LOC102353671
Uncharacterized protein.
    
 0.508
LOC102346204
Protein kinase domain-containing protein.
    
 0.508
LOC102348752
Microtubule associated tumor suppressor 1a.
    
 0.508
STK4
Serine/threonine kinase 4.
    
 0.508
STK3
Serine/threonine kinase 3.
    
 0.508
SAV1
Salvador family WW domain containing protein 1.
    
 
 0.480
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
   
  
 0.466
RASSF10
Ras association domain family member 10.
   
  
 0.449
RASSF9
Ras association domain family member 9.
   
  
 0.431
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.