Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H15Zinc finger CCCH-type containing 15. (431 aa)    
Predicted Functional Partners:
DRG1
Developmentally regulated GTP binding protein 1.
   
 0.999
DRG2
Developmentally regulated GTP binding protein 2.
   
 0.928
DNAJC2
DnaJ heat shock protein family (Hsp40) member C2.
   
 
 0.916
SSB
Small RNA binding exonuclease protection factor La.
   
    0.858
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
 
      0.817
NUDT13
Nudix hydrolase 13.
      
 0.790
RWDD1
RWD domain containing 1.
   
 
 0.773
JMJD7
Jumonji domain containing 7.
   
 
 0.768
THOC3
THO complex 3.
    
 
 0.767
USP10
Ubiquitin carboxyl-terminal hydrolase.
   
   0.737
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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