Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3A0W3_LATCHSi:ch211-63p21.8. (721 aa)    
Predicted Functional Partners:
RBX1
Ring-box 1.
    
 0.720
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
     
 0.689
CCIN
Calicin.
    
 0.668
CCT3
T-complex protein 1 subunit gamma.
    
   0.653
PM20D2
Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family.
      
 0.639
FH
Fumarate hydratase.
      
 0.613
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
      
 0.611
CCT5
Chaperonin containing TCP1 subunit 5.
    
   0.591
CCT8
Chaperonin containing TCP1 subunit 8.
    
   0.575
CCT7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
   0.564
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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