STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102354037Hairy-related 8.2. (222 aa)    
Predicted Functional Partners:
FANCL
FA complementation group L.
    
 
 0.610
FANCF
FA complementation group F.
    
 
 0.607
TLE3
TLE family member 3, transcriptional corepressor.
    
 0.519
LOC102356408
Uncharacterized protein.
    
 0.519
LOC102356682
TLE family member 2, transcriptional corepressor b.
    
 0.519
TLE5
TLE family member 5, transcriptional modulator.
    
 0.519
TLE4
Uncharacterized protein.
    
 0.519
TLE1
Uncharacterized protein.
    
 0.519
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.504
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.504
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.