Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SMTNL1Calponin-homology (CH) domain-containing protein. (388 aa)    
Predicted Functional Partners:
RTN4RL2
Reticulon 4 receptor like 2.
      
 0.741
FASTKD3
FAST kinase domains 3.
   
  
 0.653
MLIP
Uncharacterized protein.
      
 0.640
H3BFB9_LATCH
Calponin-homology (CH) domain-containing protein.
      
 0.628
SYNPO2
Synaptopodin 2.
      
 0.613
SLMAP
Sarcolemma associated protein.
   
 
 0.562
M3XHT8_LATCH
Uncharacterized protein.
      
 0.558
PM20D2
Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family.
      
 0.500
MYO9B
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.471
RNF208
Ring finger protein 208.
      
 0.467
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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