Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSPH1Radial spoke head component 1. (234 aa)    
Predicted Functional Partners:
RSPH3
Radial spoke head 3.
   
 
 0.995
RSPH9
Radial spoke head 9 homolog.
   
 
 0.995
RSPH4A
Radial spoke head component 4A.
   
 
 0.992
TEKT1
Tektin 1.
   
 
 0.959
MORN3
MORN repeat containing 3.
  
 
  
0.929
CCDC65
Coiled-coil domain containing 65.
   
 
 0.927
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.925
CFAP52
Cilia and flagella associated protein 52; Belongs to the peptidase C19 family.
   
 0.919
DRC1
Dynein regulatory complex subunit 1.
   
 
 0.914
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.913
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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