Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1491 aa)    
Predicted Functional Partners:
SLC9A3R1
SLC9A3 regulator 1.
    
 0.997
VCP
Valosin containing protein.
    
 0.988
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.987
GOPC
Golgi-associated PDZ and coiled-coil motif containing.
    
 0.985
USP10
Ubiquitin carboxyl-terminal hydrolase.
    
 0.985
STUB1
STIP1 homology and U-box containing protein 1.
    
 
 0.981
LOC102365663
Zgc:136908; Belongs to the AAA ATPase family.
    
 0.963
HSPA4
Heat shock protein family A (Hsp70) member 4.
   
 0.957
PDZK1
PDZ domain containing 1.
    
 0.951
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
     
 0.923
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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