Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3BP2G3BP stress granule assembly factor 2. (481 aa)    
Predicted Functional Partners:
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.996
USP10
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.983
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.979
NUFIP2
Nuclear FMR1 interacting protein 2.
   
 
 0.978
ATXN2L
Ataxin 2 like.
   
 
 0.974
NUP214
Nup214_FG domain-containing protein.
    
 
 0.910
FMR1
Fragile X mental retardation 1.
   
 
 0.906
LOC102367138
DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.
   
 
 0.882
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.882
EIF3B
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.856
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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