STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A117_LATCHHelicase ATP-binding domain-containing protein. (1175 aa)    
Predicted Functional Partners:
TTC37
Tetratricopeptide repeat domain 37.
   
 0.999
EXOSC7
Exosome component 7.
   
 0.991
EXOSC9
Exosome component 9.
   
 0.991
EXOSC5
Exosome component 5.
   
 0.990
EXOSC2
Exosome component 2.
   
 0.988
EXOSC3
Exosome component 3.
   
 0.987
EXOSC8
Exosome component 8.
   
 0.984
EXOSC4
Exosome component 4.
   
 0.983
WDR61
WD_REPEATS_REGION domain-containing protein.
    
 0.974
H3AS02_LATCH
Uncharacterized protein.
    
 0.974
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.