STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102365982Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
H3AIJ4_LATCH
Uncharacterized protein.
 
 
  0.923
ABCC1
ATP binding cassette subfamily C member 1.
 
  
0.922
H2ZYH4_LATCH
ABC transmembrane type-1 domain-containing protein.
 
      0.900
H3AES0_LATCH
ATP-binding cassette, sub-family C (CFTR/MRP), member 3.
 
  
0.900
MRPS7
Mitochondrial ribosomal protein S7.
      
 0.611
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.561
GOPC
Golgi-associated PDZ and coiled-coil motif containing.
   
 0.507
NICN1
Nicolin 1.
     
 0.499
SNX27
Sorting nexin 27.
    
 
 0.480
GRHL2
Grainyhead like transcription factor 2.
   
 
 0.479
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.