Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102365982Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
ABCC1
ATP binding cassette subfamily C member 1.
 
  
0.939
H3AIJ4_LATCH
Uncharacterized protein.
 
 
  0.927
H3AES0_LATCH
ATP-binding cassette, sub-family C (CFTR/MRP), member 3.
 
  
0.922
SNX27
Sorting nexin 27.
    
 
 0.916
H2ZYH4_LATCH
ABC transmembrane type-1 domain-containing protein.
 
      0.900
MRPS7
Mitochondrial ribosomal protein S7.
      
 0.809
LGALS9
Galectin.
    
   0.753
PDZK1
PDZ domain containing 1.
    
 0.685
SLC9A3R1
SLC9A3 regulator 1.
    
 0.624
ABCF2
ATP-binding cassette, sub-family F (GCN20), member 2b.
     
 0.609
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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