Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC29A4Solute carrier family 29 member 4. (527 aa)    
Predicted Functional Partners:
SLC18A2
Solute carrier family 18 member A2.
    
 
 0.795
LOC102361814
Tudor domain-containing protein.
      
 0.604
NFKBIZ
NFKB inhibitor zeta.
    
 
 0.589
SLC46A2
Solute carrier family 46 member 2.
      
 0.583
MFSD9
Major facilitator superfamily domain containing 9.
      
 0.577
LOC102352792
NAC-A/B domain-containing protein.
      
 0.565
MFSD10
Major facilitator superfamily domain containing 10.
      
 0.564
TTC25
Tetratricopeptide repeat domain 25.
      
 0.527
TIMM17B
Translocase of inner mitochondrial membrane 17B.
      
 0.524
TIMM17A
Translocase of inner mitochondrial membrane 17A.
      
 0.524
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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