Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB6Zinc finger and BTB domain containing 6. (444 aa)    
Predicted Functional Partners:
SOX8
SRY-box transcription factor 8.
    
 0.669
KLHL18
Kelch like family member 18.
    
 0.609
KCTD2
Potassium channel tetramerization domain containing 2.
    
 0.606
RRP12
Ribosomal RNA processing 12 homolog.
     
 0.581
PARPBP
PARP1 binding protein.
    
 
 0.571
VARS2
Uncharacterized protein.
    
 
 0.565
BTBD7
BTB domain containing 7.
      
 0.537
IPO9
Importin 9.
      
 0.502
H3A117_LATCH
Helicase ATP-binding domain-containing protein.
    
 
 0.482
DDAH1
Dimethylarginine dimethylaminohydrolase 1.
     
 0.481
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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