Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CACUL1CDK2 associated cullin domain 1; Belongs to the cullin family. (334 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.967
UBXN7
UBX domain-containing protein 7.
   
 0.953
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.942
ELOC
Elongin C; Belongs to the SKP1 family.
   
 0.912
UBE2M
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.887
RBX1
Ring-box 1.
    
 0.876
GPS1
G protein pathway suppressor 1.
   
 0.859
FBXO9
F-box protein 9.
    
 0.856
H3ACC6_LATCH
CXXC-type domain-containing protein.
    
 0.851
KDM2A
Lysine demethylase 2A.
    
 0.851
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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