STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONECUT1One cut homeobox 1. (370 aa)    
Predicted Functional Partners:
NELL2
Neural EGFL like 2.
    
 
 0.579
PAPPA2
Uncharacterized protein.
      
 0.572
ORC3
Origin recognition complex subunit 3.
    
 
 0.559
UNC5C
Unc-5 netrin receptor C.
      
 0.557
PAPPA-2
Uncharacterized protein.
      
 0.537
POU3F3
POU domain protein.
   
  
 0.497
AMIGO1
Adhesion molecule with Ig like domain 1.
      
 0.495
LRP1B
Uncharacterized protein.
      
 0.461
CCNG2
Cyclin G2; Belongs to the cyclin family.
    
 
 0.460
SLIT3
Slit guidance ligand 3.
      
 0.431
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.