Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ONECUT1One cut homeobox 1. (370 aa)    
Predicted Functional Partners:
CCNG2
Cyclin G2; Belongs to the cyclin family.
    
 
 0.620
FECH
Ferrochelatase; Belongs to the ferrochelatase family.
      
 0.605
FAM214A
Family with sequence similarity 214 member A.
      
 0.586
PAPPA2
Uncharacterized protein.
      
 0.583
UNC5C
Unc-5 netrin receptor C.
      
 0.549
NELL2
Neural EGFL like 2.
    
 
 0.524
PAPPA-2
Uncharacterized protein.
      
 0.522
PPEF2
Serine/threonine-protein phosphatase with EF-hands.
   
  
 0.475
PPEF1
Serine/threonine-protein phosphatase with EF-hands.
   
  
 0.475
HNF1A
HNF1 homeobox A.
     
 0.474
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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