STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102346166Ubiquitin-like domain-containing protein. (95 aa)    
Predicted Functional Partners:
NBR1
NBR1 autophagy cargo receptor.
   
 0.999
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.999
UBE2V2-2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.999
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.999
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.996
RPS26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.995
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.995
RPS17
Ribosomal protein S17.
   
 0.995
RPS10
Ribosomal protein S10.
   
 0.995
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.