STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEAK1Pseudopodium enriched atypical kinase 1. (1773 aa)    
Predicted Functional Partners:
PTPN9
Protein tyrosine phosphatase non-receptor type 9.
      
 0.741
RND2
Rho family GTPase 2.
     
 0.723
RCN2
Reticulocalbin 2.
      
 0.713
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.699
ASAP1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1.
    
 
 0.684
ITSN2
Intersectin 2.
     
 0.681
LOC102351310
Adenine phosphoribosyltransferase.
      
 0.673
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.610
RHOV
Ras homolog family member V.
    
  0.596
RHOU
Ras homolog family member Ub.
    
  0.592
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.