STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP78Centrosomal protein 78. (673 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK.
     
 0.855
TMEM82
Transmembrane protein 82.
      
 0.605
CDK11A
Cyclin-dependent kinase 11B.
     
 0.595
CDK10
Cyclin dependent kinase 10.
     
 0.571
UBXN11
UBX domain protein 11.
      
 0.555
NTAN1
N-terminal asparagine amidase.
      
 0.545
SH3BP4
SH3 domain binding protein 4.
      
 0.469
CEP290
Centrosomal protein 290.
    
 
 0.467
H3BCN4_LATCH
Tubulin tyrosine ligase-like family, member 5.
      
 0.465
TBC1D31
TBC1 domain family member 31.
   
  
 0.448
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.