Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GATA3GATA binding protein 3. (447 aa)    
Predicted Functional Partners:
LOC102352539
Uncharacterized protein.
    
 0.965
TBX21
T-box transcription factor 21.
    
 0.950
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.949
GATA2
GATA binding protein 2.
    
 0.944
NRIP1
Nuclear receptor interacting protein 1.
     
 0.929
ZFPM1
Zinc finger protein, FOG family member 1.
    
 0.909
LMO2
LIM domain only 2.
    
 0.843
FOXA2
Forkhead box A2.
    
 0.842
FOXA1
Forkhead box A1.
    
 0.842
LOC102349924
Fork-head domain-containing protein.
    
 0.842
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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