STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA3GATA binding protein 3. (447 aa)    
Predicted Functional Partners:
LOC102352539
Uncharacterized protein.
    
 0.899
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.880
NRIP1
Nuclear receptor interacting protein 1.
     
 0.872
LMO2
LIM domain only 2.
    
 0.803
ZFPM1
Zinc finger protein, FOG family member 1.
    
 0.767
FOXA2
Forkhead box A2.
    
 0.742
FOXA1
Forkhead box A1.
    
 0.742
LOC102349924
Fork-head domain-containing protein.
    
 0.742
TBX21
T-box transcription factor 21.
   
 
 0.735
CREBBP
CREB binding protein.
    
 0.723
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.