STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFARBifunctional apoptosis regulator. (454 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.618
BARD1
BRCA1 associated RING domain 1.
    
 0.571
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.562
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.551
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.532
LOC102346166
Ubiquitin-like domain-containing protein.
   
  0.520
RPS27A
Ribosomal protein S27a.
   
  0.520
LOC102350907
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.515
KXD1
Ubiquitin-like domain-containing protein.
    
 0.515
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.507
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.