STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22ATBC1 domain family member 22A. (513 aa)    
Predicted Functional Partners:
ACBD3
Acyl-CoA binding domain containing 3.
    
 
 0.652
RAB1B
RAB1B, member RAS oncogene family.
    
 
 0.626
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.626
MRPS6
Mitochondrial ribosomal protein S6.
    
   0.624
MRPL21
Mitochondrial ribosomal protein L21.
    
 
 0.566
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.565
RBM12B
RNA binding motif protein 12B.
      
 0.545
H3B2K8_LATCH
Uncharacterized protein.
   
 
 0.523
USP32
Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family.
    
 
 0.506
MRPS35
Mitochondrial ribosomal protein S35.
    
   0.483
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (30%) [HD]