STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCUBMitochondrial calcium uniporter dominant negative beta subunit. (319 aa)    
Predicted Functional Partners:
MICU1
Mitochondrial calcium uptake 1.
    
 0.963
MICU3
Mitochondrial calcium uptake family member 3.
     
 0.803
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.671
PHB
Prohibitin.
     
 0.646
PHB2
Prohibitin.
     
 0.616
LOC102349562
Prohibitin.
     
 0.616
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
     
 0.580
H3A9W0_LATCH
AAA domain-containing protein.
     
 0.580
VDAC2
Voltage dependent anion channel 2.
      
 0.474
COX11
Cytochrome c oxidase copper chaperone COX11.
      
 0.469
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.