STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC120Si:ch211-169p10.1. (560 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain containing 68.
      
 0.685
CEP170
Centrosomal protein 170.
    
 
 0.626
CEP128
Centrosomal protein 128.
    
 0.624
CCDC6
Coiled-coil domain containing 6.
      
 0.554
LRRC45
Leucine rich repeat containing 45.
      
 0.507
CEP170B
Centrosomal protein 170B.
    
 
 0.489
CEP128-2
Uncharacterized protein.
    
 0.483
LOC102348724
C2 domain-containing protein.
      
 0.424
SCLT1
Sodium channel and clathrin linker 1.
    
 
 0.423
CEP89
Centrosomal protein 89.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.