STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM106BTransmembrane protein 106B. (277 aa)    
Predicted Functional Partners:
ABCC9
ATP binding cassette subfamily C member 9.
   
  
 0.669
TARDBP
TAR DNA binding protein.
    
 
 0.627
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
      
 0.571
GRN
Granulin precursor.
      
 0.564
KCNJ8
Potassium voltage-gated channel subfamily J member 8.
      
 0.540
ATP6V1A
ATPase H+ transporting V1 subunit A.
      
 0.538
GOLT1B
Golgi transport 1B.
      
 0.535
LOC102365332
Apolipoprotein Ea.
    
 0.512
CHMP2B
Charged multivesicular body protein 2B.
   
 
 0.512
SLCO1A2
Solute carrier organic anion transporter family member.
   
  
 0.505
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.