Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CXXC5CXXC finger protein 5. (278 aa)    
Predicted Functional Partners:
BCCIP
Protein BCCIP homolog; Belongs to the BCP1 family.
      
 0.668
RNF14
RBR-type E3 ubiquitin transferase.
      
 0.660
TENT5B
Uncharacterized protein.
      
 0.655
PLK4
Polo like kinase 4.
      
 0.654
MTO1
Mitochondrial tRNA translation optimization 1.
      
 0.652
ATXN1
Ataxin 1.
      
 0.651
BRINP3
BMP/retinoic acid inducible neural specific 3.
      
 0.594
SLC41A2
Solute carrier family 41 member 2.
      
 0.594
MYCT1
MYC target 1.
      
 0.590
PABPC4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
      
 0.548
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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