STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXXC5CXXC finger protein 5. (278 aa)    
Predicted Functional Partners:
BCCIP
Protein BCCIP homolog; Belongs to the BCP1 family.
      
 0.673
MTO1
Mitochondrial tRNA translation optimization 1.
      
 0.672
RNF14
RBR-type E3 ubiquitin transferase.
      
 0.668
TENT5B
Uncharacterized protein.
      
 0.668
ATXN1
Ataxin 1.
      
 0.574
PLK4
Polo like kinase 4.
      
 0.572
PABPC4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
      
 0.538
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
      
 0.506
YWHAZ
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
      
 0.502
TENT5D
Terminal nucleotidyltransferase 5D.
      
 0.502
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.