Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMTC1Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
LOC102357667
Transmembrane O-mannosyltransferase targeting cadherins 1.
 
      0.900
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.631
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.510
LOC102354290
Uncharacterized protein.
   
 0.497
BBS9
Bardet-Biedl syndrome 9.
    
 0.491
BBS9-2
PHTB1_C domain-containing protein.
    
 0.491
TTC8
Tetratricopeptide repeat domain 8.
    
 0.491
INTS13
Integrator complex subunit 13.
   
  0.490
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.484
INTS11
Integrator complex subunit 11.
   
 0.482
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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