USP39 protein (Latimeria chalumnae) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

USP39

Ubiquitin specific peptidase 39. (522 aa)

Predicted Functional Partners:

EFTUD2

0.979

SART1

0.975

SNRNP27

0.965

PRPF8

0.945

DDX23

0.944

PRPF31

0.933

PRPF3

0.926

SNRNP40

0.920

PSMB2

0.897

PRPF4

0.894

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX23	EFTUD2	ENSLACP00000019302	ENSLACP00000014679	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Elongation factor Tu GTP binding domain containing 2.	0.999
DDX23	PRPF3	ENSLACP00000019302	ENSLACP00000011977	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Pre-mRNA processing factor 3.	0.969
DDX23	PRPF31	ENSLACP00000019302	ENSLACP00000010732	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Pre-mRNA processing factor 31.	0.962
DDX23	PRPF4	ENSLACP00000019302	ENSLACP00000018534	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Pre-mRNA processing factor 4.	0.954
DDX23	PRPF8	ENSLACP00000019302	ENSLACP00000011906	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Pre-mRNA processing factor 8.	0.999
DDX23	SART1	ENSLACP00000019302	ENSLACP00000012672	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.980
DDX23	SNRNP27	ENSLACP00000019302	ENSLACP00000019776	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein U4/U6.U5 subunit 27.	0.688
DDX23	SNRNP40	ENSLACP00000019302	ENSLACP00000019291	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein U5 subunit 40.	0.997
DDX23	USP39	ENSLACP00000019302	ENSLACP00000003537	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	Ubiquitin specific peptidase 39.	0.944
EFTUD2	DDX23	ENSLACP00000014679	ENSLACP00000019302	Elongation factor Tu GTP binding domain containing 2.	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	0.999
EFTUD2	PRPF3	ENSLACP00000014679	ENSLACP00000011977	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 3.	0.997
EFTUD2	PRPF31	ENSLACP00000014679	ENSLACP00000010732	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 31.	0.997
EFTUD2	PRPF4	ENSLACP00000014679	ENSLACP00000018534	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 4.	0.994
EFTUD2	PRPF8	ENSLACP00000014679	ENSLACP00000011906	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 8.	0.999
EFTUD2	SART1	ENSLACP00000014679	ENSLACP00000012672	Elongation factor Tu GTP binding domain containing 2.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.999
EFTUD2	SNRNP27	ENSLACP00000014679	ENSLACP00000019776	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein U4/U6.U5 subunit 27.	0.699
EFTUD2	SNRNP40	ENSLACP00000014679	ENSLACP00000019291	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein U5 subunit 40.	0.999
EFTUD2	USP39	ENSLACP00000014679	ENSLACP00000003537	Elongation factor Tu GTP binding domain containing 2.	Ubiquitin specific peptidase 39.	0.979
PRPF3	DDX23	ENSLACP00000011977	ENSLACP00000019302	Pre-mRNA processing factor 3.	DEAD-box helicase 23; Belongs to the DEAD box helicase family.	0.969
PRPF3	EFTUD2	ENSLACP00000011977	ENSLACP00000014679	Pre-mRNA processing factor 3.	Elongation factor Tu GTP binding domain containing 2.	0.997