Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A1M2_LATCHUncharacterized protein. (1602 aa)    
Predicted Functional Partners:
CDC27
Cell division cycle 27.
    
 0.490
ARID4A
AT-rich interaction domain 4A.
    
 0.441
THSD7A
Thrombospondin type 1 domain containing 7A.
    
 0.430
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.423
TMEM106B
Transmembrane protein 106B.
    
 0.419
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.416
H2ZW61_LATCH
Uncharacterized protein.
     
 0.408
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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