STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUCKS1Nuclear casein kinase and cyclin dependent kinase substrate 1. (295 aa)    
Predicted Functional Partners:
RAB29
RAB29, member RAS oncogene family.
 
    
 0.810
PM20D1
Peptidase M20 domain containing 1.
      
 0.581
PHAX
Phosphorylated adaptor for RNA export.
    
   0.523
SLC45A3
Solute carrier family 45 member 3.
 
    
 0.454
PSTPIP2
Proline-serine-threonine phosphatase interacting protein 2.
      
 0.452
NAGK
N-acetylglucosamine kinase.
      
 0.428
ZNF593
Zinc finger protein 593.
      
 0.418
TPH1
Tryptophan hydroxylase 1.
      
 0.416
SLC41A1
Solute carrier family 41 member 1.
 
 
  
 0.405
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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