Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A1Q4_LATCHUncharacterized protein. (165 aa)    
Predicted Functional Partners:
H3A711_LATCH
Uncharacterized protein.
  
     0.531
H3AC63_LATCH
Uncharacterized protein.
  
     0.514
H2ZVL6_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
 
  0.512
H3A227_LATCH
Uncharacterized protein.
  
 
  0.511
H2ZRQ4_LATCH
Uncharacterized protein.
  
 
  0.508
H3AFG3_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.491
H3ASZ0_LATCH
Uncharacterized protein.
  
     0.488
H3A0C4_LATCH
Uncharacterized protein.
  
     0.483
H3AZA9_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
 
  0.477
H3A536_LATCH
Uncharacterized protein.
  
     0.469
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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