H3A1S0_LATCH protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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gene co-occurrence

gene fusions

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[Homology]

Score

H3A1S0_LATCH

Uncharacterized protein. (429 aa)

Predicted Functional Partners:

H3A1J4_LATCH

0.495

H3BB68_LATCH

0.495

H2ZY53_LATCH

0.488

H3B0V6_LATCH

0.480

H3AX49_LATCH

0.471

H3AYY3_LATCH

0.467

H3AWM2_LATCH

0.462

H3AGS3_LATCH

0.459

H3AJD5_LATCH

0.451

H3AWW0_LATCH

0.450

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2ZY53_LATCH	H3A1S0_LATCH	ENSLACP00000002324	ENSLACP00000003591	Uncharacterized protein.	Uncharacterized protein.	0.488
H2ZY53_LATCH	H3AYY3_LATCH	ENSLACP00000002324	ENSLACP00000014854	Uncharacterized protein.	Uncharacterized protein.	0.451
H3A1J4_LATCH	H3A1S0_LATCH	ENSLACP00000003515	ENSLACP00000003591	Uncharacterized protein.	Uncharacterized protein.	0.495
H3A1J4_LATCH	H3AWW0_LATCH	ENSLACP00000003515	ENSLACP00000014131	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.494
H3A1J4_LATCH	H3AX49_LATCH	ENSLACP00000003515	ENSLACP00000014220	Uncharacterized protein.	Uncharacterized protein.	0.536
H3A1J4_LATCH	H3AYY3_LATCH	ENSLACP00000003515	ENSLACP00000014854	Uncharacterized protein.	Uncharacterized protein.	0.519
H3A1J4_LATCH	H3BB68_LATCH	ENSLACP00000003515	ENSLACP00000019139	Uncharacterized protein.	Uncharacterized protein.	0.517
H3A1S0_LATCH	H2ZY53_LATCH	ENSLACP00000003591	ENSLACP00000002324	Uncharacterized protein.	Uncharacterized protein.	0.488
H3A1S0_LATCH	H3A1J4_LATCH	ENSLACP00000003591	ENSLACP00000003515	Uncharacterized protein.	Uncharacterized protein.	0.495
H3A1S0_LATCH	H3AGS3_LATCH	ENSLACP00000003591	ENSLACP00000008844	Uncharacterized protein.	Uncharacterized protein.	0.459
H3A1S0_LATCH	H3AJD5_LATCH	ENSLACP00000003591	ENSLACP00000009756	Uncharacterized protein.	Uncharacterized protein.	0.451
H3A1S0_LATCH	H3AWM2_LATCH	ENSLACP00000003591	ENSLACP00000014043	Uncharacterized protein.	Uncharacterized protein.	0.462
H3A1S0_LATCH	H3AWW0_LATCH	ENSLACP00000003591	ENSLACP00000014131	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.450
H3A1S0_LATCH	H3AX49_LATCH	ENSLACP00000003591	ENSLACP00000014220	Uncharacterized protein.	Uncharacterized protein.	0.471
H3A1S0_LATCH	H3AYY3_LATCH	ENSLACP00000003591	ENSLACP00000014854	Uncharacterized protein.	Uncharacterized protein.	0.467
H3A1S0_LATCH	H3B0V6_LATCH	ENSLACP00000003591	ENSLACP00000015527	Uncharacterized protein.	Uncharacterized protein.	0.480
H3A1S0_LATCH	H3BB68_LATCH	ENSLACP00000003591	ENSLACP00000019139	Uncharacterized protein.	Uncharacterized protein.	0.495
H3AGS3_LATCH	H3A1S0_LATCH	ENSLACP00000008844	ENSLACP00000003591	Uncharacterized protein.	Uncharacterized protein.	0.459
H3AJD5_LATCH	H3A1S0_LATCH	ENSLACP00000009756	ENSLACP00000003591	Uncharacterized protein.	Uncharacterized protein.	0.451
H3AWM2_LATCH	H3A1S0_LATCH	ENSLACP00000014043	ENSLACP00000003591	Uncharacterized protein.	Uncharacterized protein.	0.462