Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
PPP1R27Protein phosphatase 1 regulatory subunit 27. (149 aa)    
Predicted Functional Partners:
PDIA2
Protein disulfide-isomerase.
 
  
 0.726
DHX34
DExH-box helicase 34.
   
 0.659
NFKBIB
NFKB inhibitor beta.
  
  
 0.649
ENDOV
Endonuclease V.
      
 0.599
NDUFA3
NADH:ubiquinone oxidoreductase subunit A3.
      
 0.595
SIRT7
Sirtuin 7.
    
 0.589
H3AJ81_LATCH
Serine/threonine-protein phosphatase.
   
 0.568
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.568
LOC102359594
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.568
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.568
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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