STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A1V2_LATCHPalmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (552 aa)    
Predicted Functional Partners:
PPTC7
Protein phosphatase; Belongs to the PP2C family.
    
 
 0.744
LOC102363082
Protein phosphatase; Belongs to the PP2C family.
    
 
 0.744
NAT8L
N-acetyltransferase 8 like.
      
 0.741
H3A6T5_LATCH
N-acetyltransferase domain-containing protein.
      
 0.741
PLXNA1
Plexin A1.
      
 0.579
BUB3
BUB3 mitotic checkpoint protein.
      
 0.571
SBK1
Serine/threonine-protein kinase SBK1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.510
HTT
Huntingtin.
    
 
 0.450
SOX18
SRY-box transcription factor 18.
      
 0.424
RFXANK
Regulatory factor X associated ankyrin containing protein.
  
 
 
 0.408
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.