Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSH1Slingshot protein phosphatase 1. (1000 aa)    
Predicted Functional Partners:
SSH2
Slingshot protein phosphatase 2.
  
 
 
0.975
CFL2
Cofilin 2; Belongs to the actin-binding proteins ADF family.
    
 0.971
LOC102363109
Destrin, actin depolymerizing factor; Belongs to the actin-binding proteins ADF family.
    
 0.957
LOC102360750
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
    
 0.951
LOC102360491
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
    
 0.951
MMAB
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.904
SSH3
Uncharacterized protein.
  
  
 
0.903
NMD3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.804
H3B0S1_LATCH
Uncharacterized protein.
      
 0.777
EMC6
ER membrane protein complex subunit 6.
      
 0.776
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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