STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102356557Neurexin 3a. (835 aa)    
Predicted Functional Partners:
LOC102352021
LAM_G_DOMAIN domain-containing protein.
 
      0.900
H3A3Q1_LATCH
Uncharacterized protein.
 
     
0.899
H3AMQ8_LATCH
Uncharacterized protein.
 
     
0.899
H3ARN6_LATCH
Uncharacterized protein.
 
     
0.899
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.795
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
   
 0.597
NLGN1
Neuroligin 1.
    
 0.578
LOC102354107
Neuroligin 4 X-linked a.
    
 0.578
NLGN2
Neuroligin 2.
    
 0.578
NLGN3
Neuroligin 3.
    
 0.578
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.