Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HS1BP3Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
LDAH
Lipid droplet associated hydrolase.
      
 0.792
LOC102367075
Uncharacterized protein.
    
   0.670
SNX10
Sorting nexin 10.
      
 0.625
PXK
PX domain containing serine/threonine kinase like.
      
 0.593
CHP1
Calcineurin like EF-hand protein 1.
      
 0.587
LOC102351525
Hematopoietic cell-specific Lyn substrate 1.
    
 
 0.585
SNX21
Sorting nexin family member 21.
      
 0.581
NCK2
Cytoplasmic protein.
      
 0.549
SFMBT2
Scm like with four mbt domains 2.
   
  
 0.549
NCK1
Cytoplasmic protein.
      
 0.547
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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