Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM171BFamily with sequence similarity 171 member B. (746 aa)    
Predicted Functional Partners:
ANAPC5
Anaphase promoting complex subunit 5.
      
 0.773
LOC102363384
Uncharacterized protein.
      
 0.676
CAMLG
Calcium modulating ligand.
      
 0.641
RND1
Rho family GTPase 1.
      
 0.634
ARL3
ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.
      
 0.604
MGST1
Microsomal glutathione S-transferase 1.
      
 0.597
NWD2
NACHT and WD repeat domain containing 2.
      
 0.589
DMTN
Dematin actin binding protein.
      
 0.579
RGS4
Regulator of G protein signaling 4.
   
  
 0.541
OTUD5
OTU deubiquitinase 5.
      
 0.508
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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