STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USF2Upstream transcription factor 2, c-fos interacting. (307 aa)    
Predicted Functional Partners:
USF1
Upstream transcription factor 1.
  
 
0.987
SP1
Sp1 transcription factor.
    
 0.827
LOC102352539
Uncharacterized protein.
    
 0.819
CREBBP
CREB binding protein.
    
 0.662
EP300
E1A binding protein p300.
    
 0.627
TAF6L
TATA-box binding protein associated factor 6 like.
    
 
 0.607
NCOA3
Nuclear receptor coactivator.
    
 0.585
NCOA2
Nuclear receptor coactivator 2.
    
 0.585
NCOA1
Nuclear receptor coactivator.
    
 0.585
TFAP4
Transcription factor AP-4.
    
 
 0.575
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.