STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB2Calcium and integrin binding family member 2. (161 aa)    
Predicted Functional Partners:
TMC2
Transmembrane channel-like protein.
    
 0.880
TMC1
Transmembrane channel-like protein.
    
 0.863
TMC3
Transmembrane channel-like protein.
    
 0.863
TMIE
Transmembrane inner ear.
     
 0.767
USH1C
USH1 protein network component harmonin.
    
 
 0.730
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 
 0.715
LHFPL4
LHFPL tetraspan subfamily member 4.
   
 
 0.715
RPGRIP1L
RPGRIP1 like.
    
 
 0.709
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.700
PDZD7
PDZ domain containing 7.
    
 
 0.646
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.