Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A11Solute carrier family 25 member 11; Belongs to the mitochondrial carrier (TC 2.A.29) family. (280 aa)    
Predicted Functional Partners:
CYC1
Cytochrome c1.
   
 
 0.850
NDUFV1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.797
CLN3
Battenin.
    
   0.726
VDAC2
Voltage dependent anion channel 2.
   
 
 0.723
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
   
 
 0.719
NDUFS2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
   
  
 0.700
NDUFA9
NADH:ubiquinone oxidoreductase subunit A9.
   
 
 0.689
LOC102358857
Cytochrome c oxidase assembly homolog 15 (yeast).
   
 
 0.685
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
 
 0.677
SLC25A3
Solute carrier family 25 member 3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.672
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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