STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102347078ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. (265 aa)    
Predicted Functional Partners:
LOC102358531
Uncharacterized protein.
 
      0.900
AGAP1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
 
      0.900
H3AV44_LATCH
Uncharacterized protein.
 
      0.800
LOC102351339
CARD- and ANK-containing Inflammasome Adaptor Protein.
    
 0.686
H3ADK7_LATCH
ETS domain-containing protein.
   
  
 0.582
ANK3-2
Ankyrin 3a.
    
 0.535
ANK2
Ankyrin 2.
    
 0.529
MPEG1
Macrophage expressed 1.
      
 0.505
SP6
Sp6 transcription factor.
      
 0.499
UNC5B
Unc-5 netrin receptor B.
    
  0.484
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.