STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNN1Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (282 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.884
CALML4
Calmodulin like 4.
   
 0.750
LOC102360791
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.736
LOC102361286
Calmodulin 2; Belongs to the calmodulin family.
   
 0.735
CALML6
Calmodulin like 6.
   
 0.728
LOC102345989
Uncharacterized protein.
   
 0.677
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.633
WDR1
WD repeat domain 1.
   
 
 0.597
EFHB
EF-hand domain family member B.
   
   0.558
SLA2
Src like adaptor 2.
   
 
 0.552
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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