STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPT2Palmitoyl-protein thioesterase 2. (300 aa)    
Predicted Functional Partners:
PPT1
Palmitoyl-protein thioesterase 1.
     
0.914
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
   
 
 0.905
ZDHHC13
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.867
ACSL4
Acyl-CoA synthetase long chain family member 4.
   
 
 0.846
ACSL3
Acyl-CoA synthetase long chain family member 3.
   
 
 0.846
LOC102349700
Acyl-CoA synthetase bubblegum family member 1.
   
 
 0.832
ACSL6
Uncharacterized protein.
   
 
 0.832
LOC102350238
Acyl-CoA synthetase bubblegum family member 1.
   
 
 0.832
ACSL1
Acyl-CoA synthetase long chain family member 1.
   
 
 0.832
ACSL5
Acyl-CoA synthetase long chain family member 5.
   
 
 0.832
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.