RBFOX2 protein (Latimeria chalumnae) - STRING interaction network

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RBFOX2

RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. (383 aa)

Predicted Functional Partners:

RBM24

0.828

RBM38

0.759

QKI

0.712

LOC102346971

0.636

HMGXB4

0.625

MECP2

0.609

FOXRED2

0.607

HNRNPH1

0.604

ELAVL1

0.597

SNRPC

0.581

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ELAVL1	RBFOX2	ENSLACP00000020029	ENSLACP00000003748	ELAV-like protein; Belongs to the RRM elav family.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.597
FOXRED2	HMGXB4	ENSLACP00000004189	ENSLACP00000000050	FAD dependent oxidoreductase domain containing 2.	HMG-box containing 4.	0.788
FOXRED2	RBFOX2	ENSLACP00000004189	ENSLACP00000003748	FAD dependent oxidoreductase domain containing 2.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.607
HMGXB4	FOXRED2	ENSLACP00000000050	ENSLACP00000004189	HMG-box containing 4.	FAD dependent oxidoreductase domain containing 2.	0.788
HMGXB4	RBFOX2	ENSLACP00000000050	ENSLACP00000003748	HMG-box containing 4.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.625
HNRNPH1	RBFOX2	ENSLACP00000022878	ENSLACP00000003748	Uncharacterized protein.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.604
LOC102346971	RBFOX2	ENSLACP00000003168	ENSLACP00000003748	QKI, KH domain containing, RNA binding a.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.636
MECP2	RBFOX2	ENSLACP00000012808	ENSLACP00000003748	Methyl-CpG binding protein 2.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.609
QKI	RBFOX2	ENSLACP00000017694	ENSLACP00000003748	QKI, KH domain containing RNA binding.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.712
RBFOX2	ELAVL1	ENSLACP00000003748	ENSLACP00000020029	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	ELAV-like protein; Belongs to the RRM elav family.	0.597
RBFOX2	FOXRED2	ENSLACP00000003748	ENSLACP00000004189	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	FAD dependent oxidoreductase domain containing 2.	0.607
RBFOX2	HMGXB4	ENSLACP00000003748	ENSLACP00000000050	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	HMG-box containing 4.	0.625
RBFOX2	HNRNPH1	ENSLACP00000003748	ENSLACP00000022878	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	Uncharacterized protein.	0.604
RBFOX2	LOC102346971	ENSLACP00000003748	ENSLACP00000003168	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing, RNA binding a.	0.636
RBFOX2	MECP2	ENSLACP00000003748	ENSLACP00000012808	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	Methyl-CpG binding protein 2.	0.609
RBFOX2	QKI	ENSLACP00000003748	ENSLACP00000017694	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing RNA binding.	0.712
RBFOX2	RBM24	ENSLACP00000003748	ENSLACP00000012612	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	RNA binding motif protein 24.	0.828
RBFOX2	RBM38	ENSLACP00000003748	ENSLACP00000023012	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	RNA binding motif protein 38.	0.759
RBFOX2	SNRPC	ENSLACP00000003748	ENSLACP00000015620	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.581
RBM24	RBFOX2	ENSLACP00000012612	ENSLACP00000003748	RNA binding motif protein 24.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.828